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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7246819_7251891_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7246819 - 7251891

Intron Length:

5073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

GTCTCCGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAA

U12 Branch Point Sequence:

TGTACGATGACA

Flanking Amino Acid:

SSYNTASVEKVSLSSSCLEK

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

65.2

0.38

0.9

65.5

27.9

Major PPT

71.8

0.49

0.9

61.9

39.9

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

46.7

-0.2

2.3

65.34

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048099

7224347 - 7253134

28788

ENSAPLT00000024565

7223243 - 7253134

29892

ENSAPLT00000004483

7231216 - 7253134

21919