Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_72667468_72669260_F

Intron Information:

Intron Rank:

137092

Intron Class:

major

Intron Phase:

Intron Coordinates:

72667468 - 72669260

Intron Length:

1793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCTTCAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

CATTATTTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

67.1

0.39

1.1

66.9

38.5

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

0.34

1.5

67.92

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043589

72666553 - 72669651

3099