Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_7273662_7273961_F

Intron Information:

Intron Rank:

150042

Intron Class:

major

Intron Phase:

Intron Coordinates:

7273662 - 7273961

Intron Length:

300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATACAG

5'SS Class:

major

3'SS Sequence:

TCTCTGTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTTAT

U12 Branch Point Sequence:

TCTCTGTCAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

64.4

41.5

Major BPS

58.5

0.21

1.4

51.4

Major PPT

0.54

0.9

69.3

35.7

Minor 5ss

31.4

-2.1

38.9

46.2

Minor BPS

-0.1

2.2

64.43

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030681

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030359

7268652 - 7274954

6303