Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_72921243_72923711_R

Intron Information:

Intron Rank:

149738

Intron Class:

major

Intron Phase:

Intron Coordinates:

72921243 - 72923711

Intron Length:

2469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGCTAC

5'SS Class:

major

3'SS Sequence:

TGTTCCTTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

ACATGTTTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

63.4

38.1

Major BPS

0.47

1.2

61.1

45.5

Major PPT

76.6

0.6

73.2

37.1

Minor 5ss

46.3

-0.4

2.8

64.5

41.1

Minor BPS

52.3

0.06

1.8

60.64

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019998

72920805 - 72923952

3148