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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_72922699_72922799_R

Intron Information:

Intron Rank:
149743
Intron Class:
major
Intron Phase:
Intron Coordinates:
72922699 - 72922799
Intron Length:
101

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTATGTGTC
5'SS Class:
strong_major
3'SS Sequence:
AATCGTATTGCAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CATTCAT
U12 Branch Point Sequence:
GTTTCCCAAATC
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
88.9
0.92
0.8
81.4
30.7
Major BPS
79.8
0.74
0.9
81.3
29.9
Major PPT
71
0.47
1
63.1
42
Minor 5ss
43.3
-0.7
3.1
60.6
44.5
Minor BPS
56
0.17
2
71.86
39.4

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000028098
Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000035289
72920805 - 72923952
3148