Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_72923526_72923711_R

Intron Information:

Intron Rank:

149741

Intron Class:

major

Intron Phase:

Intron Coordinates:

72923526 - 72923711

Intron Length:

186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGCTAC

5'SS Class:

major

3'SS Sequence:

TGTATCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

GATCCTGTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

63.4

38.1

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

77.5

0.62

0.9

70.5

36.1

Minor 5ss

46.3

-0.4

2.8

64.5

41.1

Minor BPS

45.4

-0.3

2.2

57.68

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029750

72920805 - 72923952

3148