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Intron Name: Anas_platyrhynchos_platyrhynchos_4_72982443_73055242_R


Intron Information:

Intron Rank:
22

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
72982443 - 73055242

Intron Length:
72800

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTAAGTCTT

5'SS Class:
strong_major

3'SS Sequence:
GGTGTTGTCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTGCAG

U12 Branch Point Sequence:
TCTGCAGCAGCT

Flanking Amino Acid:
LQLAFIDLRQGMDQLLAART

Intron Amino Acid Position:
926

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87
0.87
0.9
84.6
33.2

Major BPS
45.4
-0.2
1.8
59.3
47.1

Major PPT
68.1
0.41
1
61.1
44.6

Minor 5ss
41.9
-0.9
3.1
59.6
38.8

Minor BPS
38.7
-0.7
2.4
61.08
48.2

Associated Gene:

Gene:
EXOC6B

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

72982320 - 73255099
272780