Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73055317 - 73065774

Intron Length:

10458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGATTC

5'SS Class:

major

3'SS Sequence:

TTCTTTCCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CGCTTTTTATCC

Flanking Amino Acid:

QFNLDVEECEQFARSGPVPG

Intron Amino Acid Position:

867

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.3

75.9

34.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.6

0.78

0.7

80.2

25.4

Minor 5ss

43.9

-0.7

3.1

59.1

Minor BPS

51.7

0.03

1.6

57.65

41.9

Associated Gene:

Gene:

EXOC6B

Ensembl Gene ID:

ENSAPLG00000006898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018162

73011541 - 73255099

243559

ENSAPLT00000035872

73054198 - 73255099

200902

ENSAPLT00000043688

72982320 - 73255099

272780

ENSAPLT00000007216

73018939 - 73255099

236161

ENSAPLT00000023222

73011102 - 73255099

243998

ENSAPLT00000043646

73004281 - 73255099

250819

ENSAPLT00000022815

73050010 - 73255099

205090

ENSAPLT00000040536

73041013 - 73255099

214087

ENSAPLT00000021147

73052704 - 73255099

202396

ENSAPLT00000038793

73041158 - 73255099

213942

Intron Name: Anas_platyrhynchos_platyrhynchos_4_73055317_73065774_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: