Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_73080074_73084956_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73080074 - 73084956

Intron Length:

4883

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCCTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAA

U12 Branch Point Sequence:

TTGACCTAAATT

Flanking Amino Acid:

STFAVFTHLPGDVDVHSTMS

Intron Amino Acid Position:

820

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

74.5

37.6

Major BPS

63.9

0.35

63.9

30.3

Major PPT

78.9

0.65

0.8

74.3

30.9

Minor 5ss

39.2

-1.2

2.9

49.4

46.6

Minor BPS

65.1

0.55

1.7

80.42

41.9

Associated Gene:

Gene:

EXOC6B

Ensembl Gene ID:

ENSAPLG00000006898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022815

73050010 - 73255099

205090

ENSAPLT00000021147

73052704 - 73255099

202396

ENSAPLT00000043688

72982320 - 73255099

272780

ENSAPLT00000018162

73011541 - 73255099

243559

ENSAPLT00000040536

73041013 - 73255099

214087

ENSAPLT00000035872

73054198 - 73255099

200902