Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73085137 - 73086158

Intron Length:

1022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAACG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAC

U12 Branch Point Sequence:

CCTTCTTCCACA

Flanking Amino Acid:

TKLYGTTTFKDARHAAEEEI

Intron Amino Acid Position:

760

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.8

74.2

36.1

Major BPS

69.5

0.49

71.8

33.3

Major PPT

80.7

0.69

0.7

75.4

26.7

Minor 5ss

28.3

-2.5

2.7

42.1

Minor BPS

49.5

-0

62.68

44.2

Associated Gene:

Gene:

EXOC6B

Ensembl Gene ID:

ENSAPLG00000006898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018162

73011541 - 73255099

243559

ENSAPLT00000035872

73054198 - 73255099

200902

ENSAPLT00000043688

72982320 - 73255099

272780

ENSAPLT00000007216

73018939 - 73255099

236161

ENSAPLT00000023222

73011102 - 73255099

243998

ENSAPLT00000043646

73004281 - 73255099

250819

ENSAPLT00000022815

73050010 - 73255099

205090

ENSAPLT00000040536

73041013 - 73255099

214087

ENSAPLT00000021147

73052704 - 73255099

202396

ENSAPLT00000038793

73041158 - 73255099

213942

Intron Name: Anas_platyrhynchos_platyrhynchos_4_73085137_73086158_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: