Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73086294 - 73090017

Intron Length:

3724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGACTC

5'SS Class:

strong_major

3'SS Sequence:

TTAACCTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTTTTAACC

Flanking Amino Acid:

IKRKNVGLTELVQIIINTTH

Intron Amino Acid Position:

715

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

35.3

Major BPS

87.3

0.93

0.8

36.5

Major PPT

79.7

0.67

0.9

73.5

36.6

Minor 5ss

36.5

-1.5

3.2

50.8

45.8

Minor BPS

85.8

1.1

0.9

89.58

24.4

Associated Gene:

Gene:

EXOC6B

Ensembl Gene ID:

ENSAPLG00000006898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021147

73052704 - 73255099

202396

ENSAPLT00000038793

73041158 - 73255099

213942

ENSAPLT00000018162

73011541 - 73255099

243559

ENSAPLT00000035872

73054198 - 73255099

200902

ENSAPLT00000043688

72982320 - 73255099

272780

ENSAPLT00000007216

73018939 - 73255099

236161

ENSAPLT00000023222

73011102 - 73255099

243998

ENSAPLT00000043646

73004281 - 73255099

250819

ENSAPLT00000022815

73050010 - 73255099

205090

ENSAPLT00000040536

73041013 - 73255099

214087

Intron Name: Anas_platyrhynchos_platyrhynchos_4_73086294_73090017_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: