Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73096161 - 73096654

Intron Length:

494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

GCATTTCTAACT

Flanking Amino Acid:

TLLKKWTGVFRNILDSDNYS

Intron Amino Acid Position:

605

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

70.1

40.8

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

32.8

-2

3.1

43.8

43.5

Minor BPS

55.3

0.25

1.7

69.65

41.3

Associated Gene:

Gene:

EXOC6B

Ensembl Gene ID:

ENSAPLG00000006898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021147

73052704 - 73255099

202396

ENSAPLT00000038793

73041158 - 73255099

213942

ENSAPLT00000018162

73011541 - 73255099

243559

ENSAPLT00000035872

73054198 - 73255099

200902

ENSAPLT00000043688

72982320 - 73255099

272780

ENSAPLT00000007216

73018939 - 73255099

236161

ENSAPLT00000023222

73011102 - 73255099

243998

ENSAPLT00000043646

73004281 - 73255099

250819

ENSAPLT00000022815

73050010 - 73255099

205090

ENSAPLT00000040536

73041013 - 73255099

214087

Intron Name: Anas_platyrhynchos_platyrhynchos_4_73096161_73096654_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: