Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73100945 - 73101115

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGATCG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTGCTCACTT

Flanking Amino Acid:

RLVLQPPSNMHETLDGYRKY

Intron Amino Acid Position:

493

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

58.9

40.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

100

1.12

0.4

100

Minor 5ss

37.3

-1.4

3.2

45.1

44.8

Minor BPS

51.9

0.14

2.2

79.83

42.7

Associated Gene:

Gene:

EXOC6B

Ensembl Gene ID:

ENSAPLG00000006898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018162

73011541 - 73255099

243559

ENSAPLT00000035872

73054198 - 73255099

200902

ENSAPLT00000043688

72982320 - 73255099

272780

ENSAPLT00000007216

73018939 - 73255099

236161

ENSAPLT00000023222

73011102 - 73255099

243998

ENSAPLT00000043646

73004281 - 73255099

250819

ENSAPLT00000022815

73050010 - 73255099

205090

ENSAPLT00000040536

73041013 - 73255099

214087

ENSAPLT00000021147

73052704 - 73255099

202396

ENSAPLT00000038793

73041158 - 73255099

213942

Intron Name: Anas_platyrhynchos_platyrhynchos_4_73100945_73101115_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: