Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_73133250_73202549_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73133250 - 73202549

Intron Length:

69300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGACC

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATCAT

U12 Branch Point Sequence:

AAAACTTGAAAT

Flanking Amino Acid:

DKIGETAMKQAQQQRNLDNI

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

79.6

33.9

Major BPS

75.9

0.64

1.1

77.7

35.2

Major PPT

83.8

0.76

0.8

76.9

37.3

Minor 5ss

33.5

-1.9

3.1

43.7

Minor BPS

49.7

0.06

1.5

64.15

39.1

Associated Gene:

Gene:

EXOC6B

Ensembl Gene ID:

ENSAPLG00000006898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023222

73011102 - 73255099

243998

ENSAPLT00000018162

73011541 - 73255099

243559

ENSAPLT00000007216

73018939 - 73255099

236161

ENSAPLT00000043646

73004281 - 73255099

250819

ENSAPLT00000038793

73041158 - 73255099

213942