Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73202755 - 73206982

Intron Length:

4228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACTTT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTATTTTATTT

Flanking Amino Acid:

SKLREQMKSKRHYPALKTLE

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

81.2

33.8

Major BPS

88.7

0.96

0.8

36.5

Major PPT

76.4

0.59

0.8

68.8

37.1

Minor 5ss

49.1

-0.1

73.2

43.7

Minor BPS

61.8

0.45

1.6

79.69

Associated Gene:

Gene:

EXOC6B

Ensembl Gene ID:

ENSAPLG00000006898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018162

73011541 - 73255099

243559

ENSAPLT00000035872

73054198 - 73255099

200902

ENSAPLT00000043688

72982320 - 73255099

272780

ENSAPLT00000007216

73018939 - 73255099

236161

ENSAPLT00000023222

73011102 - 73255099

243998

ENSAPLT00000043646

73004281 - 73255099

250819

ENSAPLT00000022815

73050010 - 73255099

205090

ENSAPLT00000040536

73041013 - 73255099

214087

ENSAPLT00000021147

73052704 - 73255099

202396

ENSAPLT00000038793

73041158 - 73255099

213942

Intron Name: Anas_platyrhynchos_platyrhynchos_4_73202755_73206982_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: