Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73207029 - 73207135

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGATC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

TCCATCTCAACG

Flanking Amino Acid:

TVDKLTLCLPVLEMYSKLRE

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

0.9

74.7

35.1

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

88.1

0.86

0.7

80.4

31.6

Minor 5ss

31.5

-2.1

3.2

39.8

40.4

Minor BPS

-0

1.7

55.63

45.7

Associated Gene:

Gene:

EXOC6B

Ensembl Gene ID:

ENSAPLG00000006898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018162

73011541 - 73255099

243559

ENSAPLT00000035872

73054198 - 73255099

200902

ENSAPLT00000043688

72982320 - 73255099

272780

ENSAPLT00000007216

73018939 - 73255099

236161

ENSAPLT00000023222

73011102 - 73255099

243998

ENSAPLT00000043646

73004281 - 73255099

250819

ENSAPLT00000022815

73050010 - 73255099

205090

ENSAPLT00000040536

73041013 - 73255099

214087

ENSAPLT00000021147

73052704 - 73255099

202396

ENSAPLT00000038793

73041158 - 73255099

213942

Intron Name: Anas_platyrhynchos_platyrhynchos_4_73207029_73207135_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: