Gene Search

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

73208848 - 73215371

Intron Length:

6524

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CAACACCCCGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCAGAT

U12 Branch Point Sequence:

TTTCCCCCAACA

Flanking Amino Acid:

KVRGEAQKLKNQVTDTNRKL

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

58.9

0.22

1.2

54.7

43.1

Major PPT

59.5

0.21

0.9

33.1

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

60.7

0.33

1.9

78.63

37.1

Associated Gene:

Gene:

EXOC6B

Ensembl Gene ID:

ENSAPLG00000006898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018162

73011541 - 73255099

243559

ENSAPLT00000035872

73054198 - 73255099

200902

ENSAPLT00000043688

72982320 - 73255099

272780

ENSAPLT00000007216

73018939 - 73255099

236161

ENSAPLT00000023222

73011102 - 73255099

243998

ENSAPLT00000043646

73004281 - 73255099

250819

ENSAPLT00000022815

73050010 - 73255099

205090

ENSAPLT00000040536

73041013 - 73255099

214087

ENSAPLT00000021147

73052704 - 73255099

202396

ENSAPLT00000038793

73041158 - 73255099

213942

Intron Name: Anas_platyrhynchos_platyrhynchos_4_73208848_73215371_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: