Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73215538 - 73254509

Intron Length:

38972

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGGC

5'SS Class:

major

3'SS Sequence:

ATCTTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

GGAACCCTGACT

Flanking Amino Acid:

TDTACIGPTLRSVYDGEEHG

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

65.7

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

82.9

0.74

0.7

81.5

29.8

Minor 5ss

28.5

-2.5

3.6

41.2

45.5

Minor BPS

51.7

0.14

1.8

67.86

Associated Gene:

Gene:

EXOC6B

Ensembl Gene ID:

ENSAPLG00000006898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021147

73052704 - 73255099

202396

ENSAPLT00000038793

73041158 - 73255099

213942

ENSAPLT00000018162

73011541 - 73255099

243559

ENSAPLT00000035872

73054198 - 73255099

200902

ENSAPLT00000043688

72982320 - 73255099

272780

ENSAPLT00000007216

73018939 - 73255099

236161

ENSAPLT00000023222

73011102 - 73255099

243998

ENSAPLT00000043646

73004281 - 73255099

250819

ENSAPLT00000022815

73050010 - 73255099

205090

ENSAPLT00000040536

73041013 - 73255099

214087

Intron Name: Anas_platyrhynchos_platyrhynchos_4_73215538_73254509_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: