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Intron Name: Anas_platyrhynchos_platyrhynchos_4_73297513_73313081_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73297513 - 73313081

Intron Length:

15569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTCCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

CAGCTCTGACCT

Flanking Amino Acid:

AISLFPQMSEIETARLEPEI

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

1.2

78.8

35.5

Major BPS

69.1

0.47

60.7

37.6

Major PPT

0.79

0.8

80.9

31.1

Minor 5ss

32.4

-2

2.5

38.4

39.2

Minor BPS

46.4

-0.1

1.7

58.88

44.1

Associated Gene:

Gene:

SFXN5

Ensembl Gene ID:

ENSAPLG00000005231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005414

73297435 - 73379842

82408

ENSAPLT00000040429

73296435 - 73379842

83408