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Intron Name: Anas_platyrhynchos_platyrhynchos_4_73343017_73344749_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73343017 - 73344749

Intron Length:

1733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGTAT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

ETIFMPFRMSGYIPFGTPIV

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

38.3

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

86.6

0.82

0.7

85.3

27.9

Minor 5ss

36.4

-1.5

3.7

54.5

49.7

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

SFXN5

Ensembl Gene ID:

ENSAPLG00000005231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033740

73305319 - 73379842

74524

ENSAPLT00000005414

73297435 - 73379842

82408

ENSAPLT00000040429

73296435 - 73379842

83408

ENSAPLT00000039436

73297277 - 73379842

82566

ENSAPLT00000034914

73319378 - 73379842

60465