Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_73344805_73345591_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73344805 - 73345591

Intron Length:

787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCTC

5'SS Class:

major

3'SS Sequence:

GACTGTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAC

U12 Branch Point Sequence:

TGTTCCTTCACC

Flanking Amino Acid:

ELWAAQKIKQAIIHPDTNET

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

69.7

40.9

Major BPS

65.1

0.38

1.1

68.9

36.5

Major PPT

75.8

0.58

68.8

41.6

Minor 5ss

35.4

-1.7

3.4

50.6

45.9

Minor BPS

75.6

0.79

1.7

83.37

36.3

Associated Gene:

Gene:

SFXN5

Ensembl Gene ID:

ENSAPLG00000005231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039436

73297277 - 73379842

82566

ENSAPLT00000034914

73319378 - 73379842

60465

ENSAPLT00000033740

73305319 - 73379842

74524

ENSAPLT00000005414

73297435 - 73379842

82408

ENSAPLT00000040429

73296435 - 73379842

83408