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Intron Name: Anas_platyrhynchos_platyrhynchos_4_73434868_73435821_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
73434868 - 73435821

Intron Length:
954

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGGGT

5'SS Class:
strong_major

3'SS Sequence:
GCTCCTCCTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACCACAT

U12 Branch Point Sequence:
CCCACCCCAACC

Flanking Amino Acid:
MFEEMVNKLQALRKRPGFSK

Intron Amino Acid Position:
782

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.4
0.93
0.9
76.9
38.6

Major BPS
56.3
0.16
1
62.9
34.3

Major PPT
75.5
0.57
0.8
65.7
36

Minor 5ss
30.9
-2.2
3.6
46.8
48.5

Minor BPS
45.4
-0.3
1.9
52.02
45

Associated Gene:

Gene:
FBXO41

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73434639 - 73446618
11980