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Intron Name: Anas_platyrhynchos_platyrhynchos_4_73439451_73439619_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
73439451 - 73439619

Intron Length:
169

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTGAGACCG

5'SS Class:
major

3'SS Sequence:
ACACGTCCCACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGCTGAC

U12 Branch Point Sequence:
GTGGCGCTGACG

Flanking Amino Acid:
SRHPGSCRLTARSEGAMCKG

Intron Amino Acid Position:
448

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.8
0.61
1
57.8
41.1

Major BPS
53.9
0.1
1.2
46.4
38.9

Major PPT
62.1
0.27
0.9
53.8
35.8

Minor 5ss
27
-2.6
2.9
28.8
36.6

Minor BPS
41.1
-0.8
2.4
47.78
45.6

Associated Gene:

Gene:
FBXO41

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73434639 - 73446618
11980