Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_73440648_73442596_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73440648 - 73442596

Intron Length:

1949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTCCT

5'SS Class:

major

3'SS Sequence:

CCCCTCCGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCCAC

U12 Branch Point Sequence:

CAGCTGCCACCT

Flanking Amino Acid:

QKEQELTRKQQEVLQIDQFL

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

65.5

40.2

Major BPS

-0.2

1.4

53.5

Major PPT

65.8

0.36

0.9

60.3

29.5

Minor 5ss

33.6

-1.9

48.4

41.1

Minor BPS

31.3

-1.3

2.2

42.73

40.6

Associated Gene:

Gene:

FBXO41

Ensembl Gene ID:

ENSAPLG00000014918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015553

73434639 - 73446618

11980