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Intron Name: Anas_platyrhynchos_platyrhynchos_4_73516534_73520223_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73516534 - 73520223

Intron Length:

3690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTTCAT

5'SS Class:

major

3'SS Sequence:

TCTTCTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

AAAATAATAAAA

Flanking Amino Acid:

EQMIPVEAAPEHTDHLKSVK

Intron Amino Acid Position:

1999

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

70.7

41.1

Major BPS

70.8

0.52

70.6

31.6

Major PPT

85.1

0.79

0.8

80.1

31.8

Minor 5ss

34.6

-1.8

3.3

49.6

46.6

Minor BPS

41.7

-0.6

1.8

48.61

33.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037430

73471950 - 73536722

64773

ENSAPLT00000037162

73471950 - 73537868

65919

ENSAPLT00000036574

73471950 - 73532705

60756

ENSAPLT00000030028

73471950 - 73538777

66828

ENSAPLT00000046211

73483551 - 73531388

47838