Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_73532706_73536710_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73532706 - 73536710

Intron Length:

4005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTTCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAC

U12 Branch Point Sequence:

TTTCTCTTGACA

Flanking Amino Acid:

YRLKAQLYKMPVS*

Intron Amino Acid Position:

2914

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

77.9

36.8

Major BPS

73.9

0.59

65.3

41.6

Major PPT

82.1

0.72

0.7

81.3

30.7

Minor 5ss

37.4

-1.4

3.6

54.1

45.6

Minor BPS

77.4

0.86

1.1

83.73

29.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037430

73471950 - 73536722

64773