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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7354219_7356492_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7354219 - 7356492

Intron Length:

2274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCACGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

CTGCCGTTAATG

Flanking Amino Acid:

PKPDLIHVPKPATHNAAPSG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

79.4

29.7

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

64.4

0.32

59.3

36.8

Minor 5ss

46.6

-0.4

2.4

59.3

45.3

Minor BPS

49.4

-0.1

2.2

56.19

45.7

Associated Gene:

Gene:

PDLIM5

Ensembl Gene ID:

ENSAPLG00000004068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037074

7286690 - 7409827

123138

ENSAPLT00000022490

7286690 - 7363952

77263

ENSAPLT00000004192

7286690 - 7410363

123674