Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_73554484_73554808_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73554484 - 73554808

Intron Length:

325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGGGTGCC

5'SS Class:

major

3'SS Sequence:

CTCTCTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TGGCTTCTAACC

Flanking Amino Acid:

QPVTVAPNHTDHCYYHGHVR

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

62.1

38.4

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

80.1

0.68

0.7

72.4

32.3

Minor 5ss

27.6

-2.6

3.3

35.7

41.2

Minor BPS

49.9

-0

1.7

60.79

38.3

Associated Gene:

Gene:

ADAM33

Ensembl Gene ID:

ENSAPLG00000005645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005890

73544662 - 73566452

21791