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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7362619_7385311_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7362619 - 7385311

Intron Length:

22693

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTGAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TGTTTCTGAACA

Flanking Amino Acid:

EPEHEAAKKTNDSMEPTQPA

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

0.9

73.9

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

73.2

0.52

69.8

40.4

Minor 5ss

35.8

-1.6

2.8

40.4

Minor BPS

73.9

0.75

1.3

81.01

33.9

Associated Gene:

Gene:

PDLIM5

Ensembl Gene ID:

ENSAPLG00000004068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004192

7286690 - 7410363

123674

ENSAPLT00000037074

7286690 - 7409827

123138