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Intron Name: Anas_platyrhynchos_platyrhynchos_4_73787848_73790609_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
73787848 - 73790609

Intron Length:
2762

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGTGGG

5'SS Class:
strong_major

3'SS Sequence:
TGCTGCCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACTGAA

U12 Branch Point Sequence:
GAGCACTGAACT

Flanking Amino Acid:
DYVRLASITAGSENEVTQVN

Intron Amino Acid Position:
119

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.4
0.79
1
67.1
44.6

Major BPS
62
0.3
1
53
34.1

Major PPT
68.3
0.41
0.9
58.3
38.5

Minor 5ss
30.7
-2.2
3.4
40.1
46

Minor BPS
51
0.11
1.7
66.22
43.2

Associated Gene:

Gene:
GFRA4

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73731509 - 73796407
64899

73778714 - 73796369
17656