Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_73793512_73794224_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73793512 - 73794224

Intron Length:

713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTGTAGTAACA

Flanking Amino Acid:

ACLLAYTGIIGSPITPNYID

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

42.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

78.2

0.63

0.7

25.2

Minor 5ss

37.8

-1.4

46.8

48.5

Minor BPS

49.1

-0

2.3

71.68

40.7

Associated Gene:

Gene:

GFRA4

Ensembl Gene ID:

ENSAPLG00000005430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019526

73731509 - 73796407

64899

ENSAPLT00000005631

73778714 - 73796369

17656