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Intron Name: Anas_platyrhynchos_platyrhynchos_4_73915194_73918829_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73915194 - 73918829

Intron Length:

3636

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

KTKCTWLIEGRPNTILRLRF

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.6

22.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.97

0.7

88.8

27.4

Minor 5ss

30.8

-2.2

3.2

39.9

46.1

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

ATRN

Ensembl Gene ID:

ENSAPLG00000004965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031721

73833099 - 73948543

115445

ENSAPLT00000027020

73833437 - 73948543

115107

ENSAPLT00000005186

73809001 - 73948543

139543

ENSAPLT00000046309

73822192 - 73948543

126352