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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7398937_7404383_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7398937 - 7404383

Intron Length:

5447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTTGTATC

5'SS Class:

major

3'SS Sequence:

TCTTCCTAACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

TTCTTCCTAACC

Flanking Amino Acid:

PMCAQCNQVIRGPFLVALGK

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

79.1

34.5

Major BPS

0.6

1.2

75.9

36.3

Major PPT

73.1

0.52

0.9

67.1

38.2

Minor 5ss

42.7

-0.8

2.5

54.7

42.5

Minor BPS

68.6

0.56

1.7

78.65

Associated Gene:

Gene:

PDLIM5

Ensembl Gene ID:

ENSAPLG00000004068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004192

7286690 - 7410363

123674

ENSAPLT00000037074

7286690 - 7409827

123138