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Intron Name: Anas_platyrhynchos_platyrhynchos_4_74013709_74017645_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74013709 - 74017645

Intron Length:

3937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CGATTCCTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATAATTTTAAAC

Flanking Amino Acid:

LHFHCLTENEYEDEEAAEEF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

77.4

0.62

0.9

73.6

36.7

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

57.4

0.21

1.4

63.39

35.4

Associated Gene:

Gene:

C20orf194

Ensembl Gene ID:

ENSAPLG00000004579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004776

74012670 - 74067294

54625