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Intron Name: Anas_platyrhynchos_platyrhynchos_4_74024376_74025545_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74024376 - 74025545

Intron Length:

1170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTACTC

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

TTTTTTTCCATA

Flanking Amino Acid:

GMISSHITDNSPSRQPFVLF

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

64.4

39.8

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

87.2

0.84

0.6

84.5

23.5

Minor 5ss

42.7

-0.8

3.1

59.9

44.6

Minor BPS

50.5

0.01

1.9

70.41

36.7

Associated Gene:

Gene:

C20orf194

Ensembl Gene ID:

ENSAPLG00000004579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004776

74012670 - 74067294

54625