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Intron Name: Anas_platyrhynchos_platyrhynchos_4_74027417_74028304_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74027417 - 74028304

Intron Length:

888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

TTTTCTTTACAG

Flanking Amino Acid:

FFGTTHVPFLGNDSEMHKKP

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

80.7

33.8

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

92.4

0.95

0.6

87.4

23.1

Minor 5ss

35.6

-1.6

2.6

35.6

40.5

Minor BPS

63.6

0.29

1.8

72.3

40.7

Associated Gene:

Gene:

C20orf194

Ensembl Gene ID:

ENSAPLG00000004579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038208

74026963 - 74067294

40332

ENSAPLT00000004776

74012670 - 74067294

54625