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Intron Name: Anas_platyrhynchos_platyrhynchos_4_74038341_74041468_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74038341 - 74041468

Intron Length:

3128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATAAAT

Flanking Amino Acid:

HMKSLSLYDGDSTSIVAALF

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

81.3

32.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.4

0.82

0.7

80.4

31.6

Minor 5ss

32.7

-2

3.4

40.8

45.4

Minor BPS

64.8

0.54

1.7

85.72

33.9

Associated Gene:

Gene:

C20orf194

Ensembl Gene ID:

ENSAPLG00000004579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038208

74026963 - 74067294

40332

ENSAPLT00000004776

74012670 - 74067294

54625