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Intron Name: Anas_platyrhynchos_platyrhynchos_4_74045192_74045417_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74045192 - 74045417

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTTCA

5'SS Class:

major

3'SS Sequence:

TGCTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TTTCAACTAACA

Flanking Amino Acid:

EEFLSVAQKRLHSSVQKLFN

Intron Amino Acid Position:

586

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

35.3

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

86.5

0.82

0.7

84.4

30.6

Minor 5ss

43.4

-0.7

2.8

60.6

43.7

Minor BPS

49.6

-0

2.1

72.64

38.1

Associated Gene:

Gene:

C20orf194

Ensembl Gene ID:

ENSAPLG00000004579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004776

74012670 - 74067294

54625

ENSAPLT00000038208

74026963 - 74067294

40332