Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_74045517_74045782_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74045517 - 74045782

Intron Length:

266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTACTTTTAAAA

Flanking Amino Acid:

KISAALPELERFVQHFTVSS

Intron Amino Acid Position:

619

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

71.1

0.48

1.2

74.8

38.8

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

63.5

0.42

1.3

70.66

34.8

Associated Gene:

Gene:

C20orf194

Ensembl Gene ID:

ENSAPLG00000004579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004776

74012670 - 74067294

54625

ENSAPLT00000038208

74026963 - 74067294

40332