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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7404565_7405612_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7404565 - 7405612

Intron Length:

1048

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTGAC

5'SS Class:

major

3'SS Sequence:

CTAATCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTGTTAATAACT

Flanking Amino Acid:

CSKCQRKILGEVINALKQTW

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

69.5

35.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

68.9

0.43

0.9

61.6

34.6

Minor 5ss

34.3

-1.8

3.2

40.1

Minor BPS

53.5

0.19

1.9

74.77

41.5

Associated Gene:

Gene:

PDLIM5

Ensembl Gene ID:

ENSAPLG00000004068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037074

7286690 - 7409827

123138

ENSAPLT00000004192

7286690 - 7410363

123674