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Intron Name: Anas_platyrhynchos_platyrhynchos_4_74045901_74047216_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74045901 - 74047216

Intron Length:

1316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

ATTTTTTTAAGT

Flanking Amino Acid:

IPDSTAESDKVVITIITGLP

Intron Amino Acid Position:

659

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

87.3

0.93

0.8

36.5

Major PPT

78.8

0.65

0.9

76.9

37.3

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

71.1

0.74

1.5

85.39

35.1

Associated Gene:

Gene:

C20orf194

Ensembl Gene ID:

ENSAPLG00000004579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038208

74026963 - 74067294

40332

ENSAPLT00000004776

74012670 - 74067294

54625