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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7405734_7409495_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7405734 - 7409495

Intron Length:

3762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGAGT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TCATCTTTAAAA

Flanking Amino Acid:

LEDGDPYCETDYYALFGTMC

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

73.4

43.3

Major BPS

73.1

0.58

79.6

29.1

Major PPT

78.7

0.65

72.9

42.2

Minor 5ss

33.5

-1.9

3.2

40.4

45.5

Minor BPS

70.6

0.64

1.3

73.34

38.4

Associated Gene:

Gene:

PDLIM5

Ensembl Gene ID:

ENSAPLG00000004068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037074

7286690 - 7409827

123138

ENSAPLT00000004192

7286690 - 7410363

123674