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Intron Name: Anas_platyrhynchos_platyrhynchos_4_7409612_7410273_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7409612 - 7410273

Intron Length:

662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GATCCCATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTCTTTTTGATC

Flanking Amino Acid:

TWHDTCFVCSVCSDSLEGQT

Intron Amino Acid Position:

472

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

83.6

29.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

71.9

0.49

0.9

66.9

38.8

Minor 5ss

35.5

-1.6

2.7

43.1

43.9

Minor BPS

67.2

0.52

1.1

72.08

33.7

Associated Gene:

Gene:

PDLIM5

Ensembl Gene ID:

ENSAPLG00000004068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004192

7286690 - 7410363

123674