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Intron Name: Anas_platyrhynchos_platyrhynchos_4_74219514_74229636_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74219514 - 74229636

Intron Length:

10123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAC

U12 Branch Point Sequence:

GTCTACGTAACT

Flanking Amino Acid:

VNLEVPPNATAENESAGCVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

76.1

33.6

Major BPS

66.7

0.42

1.2

67.6

36.5

Major PPT

0.85

0.8

80.2

37.3

Minor 5ss

32.3

-2

3.3

44.3

43.6

Minor BPS

55.5

0.25

2.2

77.67

44.4

Associated Gene:

Gene:

SLC4A11

Ensembl Gene ID:

ENSAPLG00000004523

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033164

74191017 - 74280081

89065

ENSAPLT00000028770

74195413 - 74277115

81703

ENSAPLT00000020641

74149628 - 74277115

127488

ENSAPLT00000041143

74191017 - 74277115

86099

ENSAPLT00000004670

74219282 - 74277115

57834

ENSAPLT00000034703

74191017 - 74277115

86099