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Intron Name: Anas_platyrhynchos_platyrhynchos_4_74235014_74235553_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74235014 - 74235553

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAACTGTC

5'SS Class:

major

3'SS Sequence:

TTTCTTCTCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATGTTTTTATTT

Flanking Amino Acid:

NIQTCTSHLKFHLLSDTIQG

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.2

72.6

37.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.3

0.75

0.7

77.4

31.3

Minor 5ss

45.2

-0.5

3.2

65.6

39.1

Minor BPS

59.2

0.37

1.5

73.08

38.9

Associated Gene:

Gene:

SLC4A11

Ensembl Gene ID:

ENSAPLG00000004523

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041143

74191017 - 74277115

86099

ENSAPLT00000033164

74191017 - 74280081

89065

ENSAPLT00000028770

74195413 - 74277115

81703

ENSAPLT00000020641

74149628 - 74277115

127488