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Intron Name: Anas_platyrhynchos_platyrhynchos_4_74292106_74295495_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

74292106 - 74295495

Intron Length:

3390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCCCATT

5'SS Class:

major

3'SS Sequence:

TTTGTCGCTGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCAAAT

U12 Branch Point Sequence:

TTGCGATCAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.2

68.9

43.5

Major BPS

68.5

0.46

73.3

28.9

Major PPT

57.7

0.17

1.7

66.1

40.8

Minor 5ss

44.3

-0.6

3.2

66.1

Minor BPS

43.2

-0.4

2.2

64.58

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046785

74291604 - 74303975

12372