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Intron Name: Anas_platyrhynchos_platyrhynchos_4_74434479_74436018_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

74434479 - 74436018

Intron Length:

1540

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCTGAGCTT

5'SS Class:

major

3'SS Sequence:

CGGCCAGAGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAG

U12 Branch Point Sequence:

CTTTGCAGAGCA

Flanking Amino Acid:

ETRGAMPGLEGCASCGKTFS

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.33

1.3

62.8

41.6

Major BPS

51.1

0.03

1.8

71.4

45.1

Major PPT

47.9

-0.1

1.1

35.6

39.6

Minor 5ss

20.7

-3.4

4.2

38.4

46.7

Minor BPS

43.4

-0.5

2.3

61.22

44.5

Associated Gene:

Gene:

UBOX5

Ensembl Gene ID:

ENSAPLG00000004151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029808

74428356 - 74436201

7846