Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_74702387_74704055_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74702387 - 74704055

Intron Length:

1669

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCA|GCAAGAAGG

5'SS Class:

major

3'SS Sequence:

TTGGTTTTCTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

TTTCTCTGCACT

Flanking Amino Acid:

VLLCKGRVSSNVNSPAPSCL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.31

1.4

59.6

44.9

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

70.4

0.46

1.1

75.1

38.8

Minor 5ss

24.7

-2.9

3.8

37.2

40.9

Minor BPS

57.5

0.32

1.9

82.07

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041018

74702267 - 74707636

5370