Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_74815591_74823747_R

Intron Information:

Intron Rank:

138712

Intron Class:

major

Intron Phase:

Intron Coordinates:

74815591 - 74823747

Intron Length:

8157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TAATTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAATTTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

88.4

18.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.1

0.77

0.8

81.7

35.4

Minor 5ss

29.6

-2.3

2.6

32.7

42.2

Minor BPS

0.83

1.1

81.34

34.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038499

74815587 - 74823942

8356