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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_74835532_74835638_R

Intron Information:

Intron Rank:
141447
Intron Class:
major
Intron Phase:
Intron Coordinates:
74835532 - 74835638
Intron Length:
107

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTAATAATG
5'SS Class:
strong_major
3'SS Sequence:
CCTCTTCCTTAAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTTAA
U12 Branch Point Sequence:
TGTTTTTTAACC
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
82.3
0.76
1
77.4
37.4
Major BPS
87.3
0.93
0.8
78
36.5
Major PPT
71.7
0.49
1
75.3
27.3
Minor 5ss
37.2
-1.5
3
49.1
46.7
Minor BPS
79.9
0.92
1
82.49
30.8

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000023457
Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000035624
74824443 - 74835702
11260